John T. Moore - Biochemistry For Dummies

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It’s alive! It’s alive! (Thanks to biochemistry, that is.)  Biochemistry is the science of the chemical processes that allow for…well…life. If it moves, breathes, eats, or sleeps, biochemistry can probably explain how. So, it stands to reason that the fundamentals of biochemistry can get a little complicated. 
In 
 you’ll explore the carbons, proteins, and cellular systems that make up the biochemical processes that create and sustain life of all kinds. Perfect for students majoring in biology, chemistry, pre-med, health-services, and other science-related fields, this book tracks a typical college-level biochemistry class. It simplifies and clarifies the subject with easy-to-follow diagrams and real-world examples. You’ll also get: 
Explorations of cell biology, carbohydrates, proteins, lipids, and other fundamental building blocks of life Discussions of the basic structures common to all living organisms Treatments of the microscopic details of life that make us all tick If you’re looking for a hand with some of the trickier parts of biochemistry—or you just need an accessible overview of the subject—check out 
today!

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An acid may be capable of donating more than one hydrogen ion A biologically - фото 108

An acid may be capable of donating more than one hydrogen ion. A biologically important example of this type of acid is phosphoric acid (H 3PO 4), which is a triprotic acid (meaning it can donate three hydrogen ions, one at a time). The equilibria for this acid are

Biochemistry For Dummies - изображение 109

The subscripts are modified to indicate the loss of hydrogen 1, hydrogen 2, or hydrogen 3. The associated K aexpressions are all of the form

Biochemistry For Dummies - изображение 110

Here’s the breakdown for each K a:

Biochemistry For Dummies - изображение 111The value for each successive equilibrium constant often is significantly lower than the preceding value. Table 2-2illustrates some biologically important acids. You can refer to this table when working buffer problems or determining which acid is stronger.

TABLE 2-2The K aValues for Biologically Important Acids

Acid Ka1 Ka2 Ka3
Acetic acid (CH 3COOH) картинка 112
Pyruvic acid (CH 3COCOOH) картинка 113
Lactic acid (CH 3CHOHCOOH) картинка 114
Succinic acid (HOOCCH 2CH 2COOH) картинка 115 картинка 116
Carbonic acid (H 2CO 3) Biochemistry For Dummies - фото 117 Biochemistry For Dummies - фото 118
Biochemistry For Dummies - фото 119 картинка 120 картинка 121 картинка 122
Phosphoric acid (H 3PO 4) картинка 123 картинка 124 картинка 125

Acting as either an acid or a base

Some substances can’t make up their minds about what they are; they can act as either an acid or a base. Chemists classify these substances as amphiprotic or amphoteric substances. For example, the bicarbonate ion картинка 126can act as either an acid or a base:

Biochemically important molecules may also exhibit amphiprotic behavior. Amino acids contain both a basic amine картинка 127group and an acidic carboxyl Biochemistry For Dummies - изображение 128group. Therefore, they can act as either acids or bases. For example, glycine Biochemistry For Dummies - изображение 129may undergo the following reactions:

In fact, amino acids may undergo proton transfer from the carboxyl end to the amine end, forming an overall neutral species that has a positive and negative end. Species such as these are called zwitterions (not to be confused with twitterions — people who tweet until their thumbs fall off):

Buffers and pH Control A buffer solution contains the conjugate acidbase pair - фото 130

Buffers and pH Control

A buffer solution contains the conjugate acid-base pair of any weak acid or base in relative proportions to resist pH change when small amounts of either an acid or a base are added. Therefore, buffers control the pH of the solution. Buffer solutions are important in most biological systems. Many biological processes proceed effectively only within a limited pH range. The presence of buffer systems keeps the pH within this limited range.

Identifying common physiological buffers

In the human body, the pH of various body fluids is important. The pH of blood is 7.4, the pH of stomach acid is картинка 131, and the pH in the intestinal tract is картинка 132. If the pH of blood is more than 0.2 pH units lower than normal, a condition known as acidosis results; a corresponding increase in pH of about the same magnitude is alkalosis. Acidosis and alkalosis, which may lead to serious health problems, each have two general causes:

Respiratory acidosis is the result of many diseases that impair respiration, including pneumonia, emphysema, and asthma. These diseases are marked by inefficient expulsion of carbon dioxide, leading to an increase in the concentration of carbonic acid, H2CO3.

Metabolic acidosis is due to a decrease in the concentration of (the bicarbonate ion). This decrease may be the result of certain kidney diseases, uncontrolled diabetes, and cases of vomiting involving nonacid fluids. Poisoning by an acid salt may also lead to metabolic acidosis.

Respiratory alkalosis may result from hyperventilation because this excessive removal of carbon dioxide can lead to a decrease in the H2CO3 concentration. Immediate treatment includes breathing into a paper bag, which increases the carbon dioxide concentration in the inhaled air and, therefore, in the blood.

Metabolic alkalosis may result from excessive vomiting of stomach acid.

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