Xiaoping Sun - Organic Mechanisms

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This book helps readers move from fundamental organic chemistry principles to a deeper understanding of reaction mechanisms. It directly relates sophisticated mechanistic theories to synthetic and biological applications and is a practical, student-friendly textbook.<br /><br /> <div id="_mcePaste" style="position: absolute; left: -10000px; top: 0px; width: 1px; height: 1px; overflow: hidden;">Presents material in a student-friendly way by beginning each chapter with a brief review of basic organic chemistry, followed by in-depth discussion of certain mechanisms</div> <div id="_mcePaste" style="position: absolute; left: -10000px; top: 0px; width: 1px; height: 1px; overflow: hidden;"> </div> <div id="_mcePaste" style="position: absolute; left: -10000px; top: 0px; width: 1px; height: 1px; overflow: hidden;">Includes end-of-chapter questions in the book and offers an online solutions manual along with PowerPoint lecture slides for adopting instructors</div> <div id="_mcePaste" style="position: absolute; left: -10000px; top: 0px; width: 1px; height: 1px; overflow: hidden;"> </div> <div id="_mcePaste" style="position: absolute; left: -10000px; top: 0px; width: 1px; height: 1px; overflow: hidden;">Adds more examples of biological applications appealing to the fundamental organic mechanisms</div> <div> <ul> <li>Presents material in a student-friendly way by beginning each chapter with a brief review of basic organic chemistry, followed by in-depth discussion of certain mechanisms</li> <li>Includes end-of-chapter questions in the book and offers an online solutions manual along with PowerPoint lecture slides for adopting instructors</li> <li>Adds more examples of biological applications appealing to the fundamental organic mechanisms</li> </ul> </div>

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Unimolecular reactions

A unimolecular reaction ( Eq. 1.1: A ➔ P) follows the first‐order rate law as shown in Equation 1.9

(1.9) Organic Mechanisms - изображение 12

where k is the rate constant(with the typical unit of s −1) for the reaction, and it is independent of the concentration of the reactant. The rate constant is the quantitative measure of how fast the reaction proceeds at a certain temperature.

Rearranging Equation 1.9leads to

(1.10) Organic Mechanisms - изображение 13

Integrating Equation 1.10on both sides and applying the boundary condition t = 0, [A] = [A] 0(initial concentration), we have

(1.11) From Equation 111 we have lnA lnA 0 kt Therefore 112 Equation - фото 14

From Equation 1.11, we have ln[A] – ln[A] 0= − kt

Therefore,

(1.12) Equation 112is the integrated rate law for a unimolecular reaction The - фото 15

Equation 1.12is the integrated rate law for a unimolecular reaction.

The half‐life ( t 1/2) of reactant A (the time required for conversion of one‐half of the reactant to the product, i.e., when t = t 1/2, [A] = ½ [A] 0) can be solved from Equation 1.12as follows:

Organic Mechanisms - изображение 16

Therefore,

(1.13) Organic Mechanisms - изображение 17

Equation 1.13shows that the half‐life of a substance that undergoes first‐order decay is inversely proportional to the rate constant and independent of the initial concentration.

Bimolecular reactions

A bimolecular reaction that involves two reactant molecules of the same compound ( Eq. 1.4: 2A ➔ P) follows the second‐order rate law as shown below:

(1.14) Organic Mechanisms - изображение 18

where k is the rate constant (with the typical unit of M −1s −1) for the reaction.

Rearranging Equation 1.14leads to

(1.15) Organic Mechanisms - изображение 19

Integrating Equation 1.15on both sides and applying the boundary condition t = 0, [A] = [A] 0(initial concentration), we have

(1.16) Organic Mechanisms - изображение 20

From Equation 1.16, we have

(1.17) Organic Mechanisms - изображение 21

Equation 1.17is the integrated rate law for a bimolecular reaction involving two molecules from the same compound.

A bimolecular reaction that involves two reactant molecules of different compounds ( Eq. 1.5: A + B ➔ P) also follows the second‐order rate law (first‐order in each of the reactants) as shown in Equation 1.18.

(1.18) Assume that at a given time t the molar concentration of the product P is x - фото 22

Assume that at a given time t , the molar concentration of the product P is x . Therefore, the molar concentrations of reactants A and B are [A] = [A] 0− x and [B] = [B] 0− x , respectively. [A] 0and [B] 0are initial concentrations of reactants A and B, respectively.

From Equation 1.18, we have

(1.19) Organic Mechanisms - изображение 23

If the quantities of the two reactants A and B are in stoichiometric ratio ([A] 0 = [B] 0 ), Equation 1.19becomes

(1.20) Organic Mechanisms - изображение 24

Rearranging Equation 1.20leads to Equation 1.21.

(1.21) Organic Mechanisms - изображение 25

Integrating Equation 1.21on both sides and applying the boundary condition t = 0, x = 0, we have

(1.22) From Equation 122 we have 123 Since A A 0 x Equation 123becomes - фото 26

From Equation 1.22, we have

(1.23) Since A A 0 x Equation 123becomes If the reactants A and B have - фото 27

Since [A] = [A] 0− x , Equation 1.23becomes

If the reactants A and B have different initial concentrations Equation - фото 28

If the reactants A and B have different initial concentrations, Equation 1.19becomes

(1.24) Integrating Equation 124on both sides and applying the boundary condition t - фото 29

Integrating Equation 1.24on both sides and applying the boundary condition t = 0, x = 0, we have

(1.25) From Equation 125 we have 126 Since A A 0 x and B B 0 x - фото 30

From Equation 1.25, we have

(1.26) Since A A 0 x and B B 0 x Equation 126becomes 127 - фото 31

Since [A] = [A] 0− x and [B] = [B] 0− x , Equation 1.26becomes

(1.27) Equation 127represents the integrated rate law for a bimolecular reaction - фото 32

Equation 1.27represents the integrated rate law for a bimolecular reaction involving two different reactant molecules with different initial concentrations.

If one of the reactants (such as B) in Equation 1.5(the bimolecular reaction: A + B ➔ P) is in large excess (typically 10–20‐folds, i.e., [B] 0/[A] 0= 10–20), the change in molar concentration of reactant B in the course of the reaction can be neglected ([B] ~ [B] 0) [2]. The rate law ( Eq. 1.18) becomes

Organic Mechanisms - изображение 33

Let k ′ = k [B] 0(the observed rate constant). We have

Organic Mechanisms - изображение 34

The reaction becomes pseudo first order. The integrated rate law is

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