George Acquaah - Principles of Plant Genetics and Breeding

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The revised edition of the bestselling textbook, covering both classical and molecular plant breeding Principles of Plant Genetics and Breeding Now in its third edition, this essential textbook contains extensively revised content that reflects recent advances and current practices. Substantial updates have been made to its molecular genetics and breeding sections, including discussions of new breeding techniques such as zinc finger nuclease, oligonucleotide directed mutagenesis, RNA-dependent DNA methylation, reverse breeding, genome editing, and others. A new table enables efficient comparison of an expanded list of molecular markers, including Allozyme, RFLPs, RAPD, SSR, ISSR, DAMD, AFLP, SNPs and ESTs. Also, new and updated “Industry Highlights” sections provide examples of the practical application of plant breeding methods to real-world problems. This new edition:
Organizes topics to reflect the stages of an actual breeding project Incorporates the most recent technologies in the field, such as CRSPR genome edition and grafting on GM stock Includes numerous illustrations and end-of-chapter self-assessment questions, key references, suggested readings, and links to relevant websites Features a companion website containing additional artwork and instructor resources 
offers researchers and professionals an invaluable resource and remains the ideal textbook for advanced undergraduates and graduates in plant science, particularly those studying plant breeding, biotechnology, and genetics.

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17 Kindiger, B. and Sokolov, V. (1997). Progress in the development of apomictic maize. Trends in Agronomy 1: 75–94.

18 Kindiger, B., Blakey, C.A., and Dewald, C.L. (1995). Sex reversal in maize x Tripsacum hybrids: allelic non‐complementation of ts2 and gsf1. Maydica 40: 187–190.

19 Kindiger, B., Sokolov, V., and Dewald, C.L. (1996a). A comparison of apomictic reproduction in eastern gamagrass (Tripsacum dactyloides (L.)) and maize‐Tripsacum hybrids. Genetica 97: 103–110.

20 Kindiger, B., Bai, D., and Sokolov, V. (1996b). Assignment of gene(s) conferring apomixis in Tripsacum to a chromosome arm: cytological and molecular evidence. Genome 39: 1133–1141.

21 Leblanc, O., Griminelli, D., Gonzalez‐de‐Leon, D., and Savidan, Y. (1995). Detection of the apomictic mode of reproduction in maize‐Tripsacum hybrids using maize RFLP markers. Theoretical and Applied Genetics 90: 1198–1203.

22 Leblanc, O., Griminelli, D., Islan‐Faridi, N. et al. (1996). Reproductive behavior in maize‐Tripsacum polyhaploid plants: implications for the transfer of apomixis into maize. The Journal of Heredity 87: 108–111.

23 Li, D., Blakey, C.A., Dewald, C.L., and Dellaporta, S.L. (1997). Evidence for a common sex determination mechanism for pistil abortion in maize and its wild relative Tripsacum. PNAS USA 94: 4217–4222.

24 Maguire, M. (1957). Cytogenetic studies of a Zea hyperploid for a chromosome derived from Tripsacum. Genetics 42: 474–486.

25 Maguire, M. (1960). A study of homology between a terminal portion of Zea chromosome 2 and a segment derived from Tripsacum. Genetics 45: 195–209.

26 Maguire, M. (1962). Common loci in corn and Tripsacum. The Journal of Heredity 53: 87–88.

27 Mangelsdorf, P. C. and R. G. Reeves. 1939. The origin of Indian corn and its relatives. Texas Agric. Exp. Stn. Bull. No. 574.

28 Petrov, D.F., Belousova, N.I., and Sl Fokina, E. (1979). Inheritance of apomixis and its elements in maize x Tripsacum dactyloides hybrids. Genetika 15: 1827–1836.

29 Petrov, D.F., Belousova, N.I., Fokina, E.S. et al. (1984). Transfer of some elements of apomixis from Tripsacum to maize. In: Apomixis and Its Role in Evolution and Breedint (ed. D.F. Petrov), 9–73. New Delhi, India: Oxonian Press Ltd.

30 Poggio, L., Confalonieri, V., Comas, C. et al. (1999). Genomic in situ hybridization (GISH) of Tripsacum dactyloides and Zea mays ssp. mays with B chromosomes. Genome 42: 687–691.

31 de Wet, J.M.J., Timothy, D.H., Hilu, K.W., and Fletcher, G.B. (1981). Systematics of South American Tripsacum (Gramineae). American Journal of Botany 68: 269–276.

32 de Wet, J.M.J., Harlan, J.R., and Brink, D.E. (1982). Systematics of Tripsacum dactyloides (Gramineae). American Journal of Botany 69: 1251–1257.

33 Xu, S.J. and Joppa, L.R. (1995). Mechanisms and inheritance of first division restitution in hybrids of wheat, rye, and Aegilops squarrosa. Genome 38: 607–615.

6.11.1 Objectives of wide crosses

Wide crosses may be undertaken for practical and economic reasons, research purposes, or to satisfy curiosity. Specific reasons for wide crosses include the following:

Economic crop improvementThe primary purpose of wide crosses is to improve a species for economic production by transferring one or a few genes, or segment of chromosomes or whole chromosomes from a donor across interspecific or intergeneric boundaries. The genes may condition a specific disease or pest resistance, or may be a product quality trait, flower shape, or color novelty in ornamentals, among other traits. In some species such as sugarcane, cotton, sorghum, and potato, hybrid vigor is known to have accompanied certain crosses.

New character expressionNovelty is highly desirable in the ornamental industry. Combining genomes from diverse backgrounds may trigger a complementary gene action or even introduce a few genes that could produce previously unobserved phenotypes that may be superior to the parental expression of both qualitative and quantitative traits.

Creation of new alloploidsWide crosses often produce sterile hybrids. The genome of such hybrids can be doubled to create a new fertile alloploid species (a polyploid with the genomes of different species), such as triticale, which is a synthetic species which consists of the genomes of (mostly) tetraploid wheat and rye.

Scientific studiesCytogenetic studies following a wide cross may be used to understand the phylogenic relationships between the species involved.

Curiosity and esthetic valueWide crosses may produce unique products of ornamental value, which can be useful to the horticultural industry. Sometimes just being curious is a good enough reason to try new things.

6.11.2 Selected success with wide crosses

Developing commercial cultivars with genes introduced from the wild can be an expensive and long process (see prebreeding in Chapter 8). Some linkages with genes of the wild donor need to be broken. In tomato, it took 12 years to break the linkage between nematode resistance and undesirable fruit characteristics. Nonetheless, some significant successes have been accomplished through wide crosses.

Natural wide crossesNatural wide crosses have been determined by scientists to be the origin of numerous modern‐day plants of economic importance. Ornamentals such as irises, cannas, dahlias, roses, and violets are among the list of such species. In tree crops, apples, cherries, and grapes are believed to have originated as natural wide crosses, and so are field crops such as wheat, tobacco, and cotton, as well as horticultural crops like strawberry and sweet potatoes. Most natural wide cross products of economic value to modern society are used as ornamentals and are usually propagated vegetatively. This led G.L. Stebbins to observe that wide crosses may be more valuable in vegetatively propagated species than in seed‐propagated species.

Synthetic (artificial) wide crosses.Apart from natural occurrences, plant breeders over the years have introgressed desirable genes into adapted cultivars from sources as close as wild progenitors to distant ones such as different genera. Practical applications of wide crosses may be grouped into three categories as follows:Gene transfer between species with the same chromosome numberWide crosses between two tomato species, Lycopersicon pimpinellifolium × L. esculentum, have been conducted to transfer resistance genes to diseases such as leaf mold and Fusarium wilt. Gene transfers in which both parents have identical chromosome numbers is often without complications beyond minor ones (e.g. about 10 percent reduction in pollen fertility). It is estimated that nearly all commercially produced tomatoes anywhere in the world carry resistance to Fusarium that derived from a wild source.Gene transfer between species with different number of chromosomesCommon wheat is a polypoid (an allohexaploid with a genomic formula of AABBDD). It has 21 pairs of chromosomes. There is diploid wheat, einkorn (Triticum monococcum), with seven pairs of chromosomes and a genomic formula of AA. It should be pointed out that later studies of the origin of the A genome showed that the diploid component of the Triticum genus is comprised of two distinct biological species, T. monococcum and T. urartu. The A in breadwheat is believed to be from T. urartu. There are several tetraploid wheats (AABB) such as emmer wheat (T. dicoccum). Transfer of genes from species of lower ploidy to common wheat is possible (but not always the reverse). Stem rust resistance is one such gene transfer that was successful.Gene transfer between two generaCommon wheat comprises three genomes of which one (DD) is from the genus Aegilops (A. tauschii). Consequently, gene transfers have been conducted between Triticum and Aegilops (e.g. for genes that confer resistance to leaf rust). Other important donors of resistance are Secale cereal (rye) and Agropyron sp.Developing new species via wide crossingA species is defined as a population of individuals capable of interbreeding freely with one another but which, because of geographic, reproductive, or other barriers, do not in nature interbreed with members of other species. One of the long‐term “collaborative” breeding efforts is the development of the triticale (X Triticosecale Wittmack). The first successful cross, albeit sterile, is traced back to 1876; the first fertile triticale was produced in 1891. The development of this new species occurred over a century, during which numerous scientists modified the procedure to reach its current status where the crop is commercially viable. Triticale is a wide cross between Triticum (wheat) and Secale (rye), hence triticale (a contraction of the two names). It is predominantly a self‐fertilizing crop. The breeding of triticale is discussed in Chapter 17.

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