Individual Participant Data Meta-Analysis

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Individual Participant Data Meta-Analysis: A Handbook for Healthcare Research Split into five parts, the book chapters take the reader through the journey from initiating and planning IPD projects to obtaining, checking, and meta-analysing IPD, and appraising and reporting findings. The book initially focuses on the synthesis of IPD from randomised trials to evaluate treatment effects, including the evaluation of participant-level effect modifiers (treatment-covariate interactions). Detailed extension is then made to specialist topics such as diagnostic test accuracy, prognostic factors, risk prediction models, and advanced statistical topics such as multivariate and network meta-analysis, power calculations, and missing data.
Intended for a broad audience, the book will enable the reader to:
Understand the advantages of the IPD approach and decide when it is needed over a conventional systematic review Recognise the scope, resources and challenges of IPD meta-analysis projects Appreciate the importance of a multi-disciplinary project team and close collaboration with the original study investigators Understand how to obtain, check, manage and harmonise IPD from multiple studies Examine risk of bias (quality) of IPD and minimise potential biases throughout the project Understand fundamental statistical methods for IPD meta-analysis, including two-stage and one-stage approaches (and their differences), and statistical software to implement them Clearly report and disseminate IPD meta-analyses to inform policy, practice and future research Critically appraise existing IPD meta-analysis projects Address specialist topics such as effect modification, multiple correlated outcomes, multiple treatment comparisons, non-linear relationships, test accuracy at multiple thresholds, multiple imputation, and developing and validating clinical prediction models Detailed examples and case studies are provided throughout.

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It would be unwise to attempt to initiate a new prospective meta‐analysis without involvement of someone with prior experience of these unique projects.

3.13 Concluding Remarks

In summary, initiating an IPD meta‐analysis project requires a great deal of thought, planning and preparation, which can take a considerable length of time. However, this investment is essential to maximising chances of success, and time invested at this stage will pay dividends later. Once the team and funding are in place and necessary approvals granted, the project can move on to developing the full protocol and beginning to collect, assemble and check the IPD that will be needed for analysis, as described in Chapter 4.

4 Running an IPD Meta‐Analysis Project: From Developing the Protocol to Preparing Data for Meta‐Analysis

Jayne F. Tierney, Richard D. Riley, Larysa H.M. Rydzewska, and Lesley A. Stewart

Summary Points

Collecting, checking and managing IPD is more involved and complex than extracting or collecting existing aggregate data, but is fundamental for ensuring that subsequent IPD meta‐analyses are robust and comprehensive.

An IPD meta‐analysis protocol should be registered or published, and include details of: the objectives, eligibility criteria, outcomes to be evaluated and the particular participant‐level covariates to be included or examined; the processes for collecting, coding and checking data and assessing risk of bias, and the statistical methods.

A separate comprehensive statistical analysis plan may also be necessary.

The project should aim to maximise the quantity of high‐quality IPD collected, in order to limit bias and uncertainty of results, and to complete the planned analyses reliably.

Negotiating and maintaining collaboration with trial investigators can take considerable time and effort, but is critical to the success of most IPD projects.

IPD should be transferred and stored securely, and used carefully and appropriately, in order to respect participant confidentiality, whilst also adhering to the data use agreements put in place with the data providers.

Variables contained in the supplied IPD will often need to be re‐coded, re‐defined or derived in a format that is common to all trials, to enable subsequent meta‐analysis.

Data checking is essential to help identify and rectify any major errors, inconsistencies or biases in the IPD, as well as promoting better understanding of individual trials. Such scrutiny may also afford credibility, which may be important for controversial or high‐profile projects.

A detailed log of all changes and transformations made to trial IPD should be maintained, to enable transparency and reproducibility.

Assessment of risk of bias for each trial is initially based on information from trial publications or protocols, supplemented by any information provided by the trial investigator, and is then refined once IPD have been received, checked and cleaned.

Some risk of bias concerns may be alleviated by having the IPD (e.g. inclusion of participants excluded from trial analyses), and others that may only become apparent from checking the IPD (e.g. an allocation pattern indicative of flawed randomisation).

Ultimately, all collaborators will have input into the interpretation and dissemination of results.

It can be helpful to incorporate patient and public involvement and engagement throughout the project, for example, to input into the development of the research questions, and the interpretation and dissemination of results.

4.1 Introduction

Once it has been established that an IPD meta‐analysis project is both appropriate ( Chapter 2) and feasible ( Chapter 3), and suitable personnel, governance and funding are in place ( Chapter 3), there is a need to set up systems and processes that will ensure it will be conducted well. This chapter provides guidance on the preparations needed just prior to the collection of IPD ( Section 4.2), and how to go about establishing and maintaining collaboration with IPD providers. It also outlines the steps (shown in Figure 4.1) needed to obtain, check and manage IPD ( Sections 4.4and 4.5), and to investigate risk of bias ( Section 4.6), prior to final verification and merging of data ( Sections 4.8and 4.9) in readiness for analysis ( Part 2). This stage is often underappreciated, but is critical to ensuring the success of the project and that subsequent meta‐analyses are robust and comprehensive. We focus on projects that aim to collate IPD from multiple randomised trials to examine the effect of a particular treatment, but very similar principles apply when seeking IPD from other study types, such as observational studies for diagnosis or prognosis ( Part 5).

Figure 41Overview of key steps involved in obtaining managing and checking - фото 5

Figure 4.1Overview of key steps involved in obtaining, managing and checking IPD from a single trial.

Source: Larysa Rydzewska and Jayne Tierney.

4.2 Preparing to Collect IPD

In this section, we discuss various aspects that should be considered when preparing to collect IPD. This critical set‐up stage occurs before formal requests for IPD are sent to trial investigators, but may still involve initial discussions with them, in order to gain clarity on the eligibility of their trials and the IPD they might be able to provide.

4.2.1 Defining the Objectives and Eligibility Criteria

Usually, the objectives and eligibility criteria for trials (and thus their IPD) will have already been defined, either in full or in part, using the PICOS or another similar framework, 42when developing a project scope ( Section 3.3) or funding application ( Section 3.9). However, they may still need to be refined at this stage. Figure 4.2shows the PICOS elements that underlie the objective and eligibility criteria for an IPD meta‐analysis of pre‐operative chemotherapy for non‐small‐cell lung cancer. 88

The type of trials deemed eligible for an IPD meta‐analysis project may depend not only on the specifics of the research question and the healthcare area, but also the proportion that are required for reliable synthesis, and are feasible to collect. Such elements should be explicitly considered in formulating the research question, and be built into the inclusion and exclusion criteria, with the rationale for doing so described. In healthcare areas where trials tend to be very large, it may not be worth including IPD from small trials if they would contribute little weight to the evidence base, but take a similar effort to obtain and manage as the larger trials. For example, in an IPD meta‐analysis of the efficacy and safety of more intensive lowering of LDL cholesterol, eligibility was restricted to those randomised trials that aimed to recruit 1,000 or more participants with a treatment duration of at least two years. 89However, depending on the research question, it should be noted that the information size for a trial usually depends on more factors than the total participants ( Section 2.6.3), and that statistical power calculations can be used in advance of IPD collection to more appropriately identify which trials provide the most information ( Chapter 12), and thereby indicate which should be prioritised for data collection.

Similarly, if older trials are potentially eligible, but might be particularly difficult to track down or are less applicable, then it might be appropriate to exclude them. For example, older trials using long‐term alkylating agents were excluded from an IPD meta‐analysis of the effects of adjuvant chemotherapy for non‐small‐cell lung cancer, 90because previously they had been found to be harmful to patients, 12and therefore were no longer of relevance to the clinical question.

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