Jeanne-Marie Membre - Microbiological Risk Assessment Associated with the Food Processing and Distribution Chain

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According to the World Health Organization, one in every ten people worldwide falls ill from eating contaminated food every year, with 550 million cases of diarrheal diseases. Microbiological risk assessment aims to characterize the nature and probability of harm resulting from human exposure to the biological agents that are present in foodstuffs. This assessment must take into account all stages of the chain: from the production of raw materials to consumption. After briefly introducing food safety and risk assessment, this book details the four major steps of microbiological risk assessment. The contributors first present hazard identification and then exposure assessment, which is subdivided into methods for the detection and enumeration of pathogens and for the quantification of the level of exposure. Then, hazard characterization is subdivided into pathogenicity mechanisms and quantification of the dose–response relationship. Finally a guide for microbiological risk characterization is provided. The conclusion presents possible development avenues for microbiological risk assessment, particularly its integration into a holistic assessment of food systems.

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Hazard identification is, and will remain, an essential step in food safety. The work of hazard identification requires cross-referencing different types of knowledge and information:

– knowledge of the product and its processes, provided in particular by field expertise;

– knowledge of consumer practices, provided in particular by surveys, in addition to labeling, which indicates the main trends;

– knowledge of microbial behavior provided by previous studies from the scientific literature, hazard factsheets prepared by health safety agencies, forecasting models, etc.;

– epidemiological data including surveillance data on prevalence and concentrations, withdrawals/recalls indicated by early warning systems, reports of toxi-infections at the country level, public health data, etc.

This entails a substantial amount of research work, as well as, above all, documentary work. This work should be assigned to a highly qualified team with proven skills in food microbiology.

Several avenues of research in hazard identification can be envisaged for the future. One, which is not new as such but which will definitely take on importance, is the early identification of emerging hazards constrained by change. Kleter and Marvin (2009) have proposed three types of constraints classified as those related to changes in the environment, in the production methods (processes and formulations) of the food and in the food preferences of consumers.

The environment is changing, especially under the influence of climate change, which will affect the emergence and persistence of bacteria, viruses, parasites, harmful algae, fungi, etc. The WHO is expecting projected climate change to negatively impact on food safety, especially in low- and middle-income countries (WHO 2019). Even in Europe, climate change will have consequences for food safety. For example, a recent review focusing on microbial risks in the dairy industry (Feliciano et al. 2020) pointed out that raw milk is sensitive to climate change, as its quality can be affected by fluctuations in ambient temperature and the amount of rainfall. Climate change can induce microbiota changes and stress in lactating cows, with a risk of increasing their vulnerability to microbial infections and consequently higher microbial contamination of milk.

Under its Food 2030 agenda, the European Union considers food safety as part of a food system including nutrition, climate, circularity (resource efficiency) and innovation (empowering communities) (European Commission 2016). In the EU, there are societal expectations for sustainable food production, especially in terms of food safety and quality and also environmental and animal welfare standards (European Commission 2016). This much more general integration of food safety in a study of a complete food system (from new cultivation methods to consumer expectations) opens up perspectives in risk assessment which are taken up again in the Conclusion of this book. This is also important to take into account when identifying hazards since it can lead to the emergence or re-emergence of new hazards: new ingredients, new combinations of ingredients, new cooking calculations, new processes, etc.

Regarding consumer food preferences, a recent report in the Sénat (Cartron and Fichet 2020) pointed to a boom in France in organic and sustainable agricultural production methods. The turnover from organic food has multiplied by 10 in 20 years, with an acceleration since the early 2010s. Likewise, the consumer is turning to locally sourced products. ANSES (2017b) has flagged up other changes in the eating practices of French consumers; for example, they are tending to eat more raw products, consume seeds or nuts on a regular basis and cut back on dairy products and replace them with soy products. These practices are followed in the best of faith, but may present certain health risks. A recent study conducted at INRAE (Eygue et al. 2020) has shown that these new practices generate a wide variety of hazards, such as bacteria, parasites, mycotoxins, allergens and chemical compounds, which are potentially linked to a wide range of health impacts, such as food poisoning, anaphylaxis, cancer, immunosuppression and endocrine disorders.

Hazard identification is therefore a “never-ending story”. It must be reviewed and augmented regularly on the basis of new knowledge and new tools made available to the scientific community and must take into account the perpetual changes in the environment and in the production and consumption of food products.

1.8. References

AFNOR (2011). Norme NF V08-602 – Microbiologie des aliments – Dénombrement des spores dans les produits alimentaires avant traitement d’appertisation par comptage des colonies. AFNOR Store Publishing, Paris.

Anderson, N.M., Larkin, J.W., Cole, M.B., Skinner, G.E., Whiting, R.C., Gorris, L.G.M., Rodriguez, A., Buchanan, R., Stewart, C.M., Hanlin, J.H., Keener, L., Hall, P.A. (2011). Food Safety Objective approach for controlling Clostridium botulinum growth and toxin production in commercially sterile foods. Journal of Food Protection , 74(11), 1956–1989.

ANSES (2017a). Attribution des sources des maladies infectieuses d’origine alimentaire. Partie 1 : Revue des méthodes et inventaire des données [Online]. Available at: https://www.anses.fr/fr/system/files/BIORISK2015SA0162Ra.pdf.

ANSES (2017b). INCA 3 : Evolution des habitudes et modes de consommation, de nouveaux enjeux en matière de sécurité sanitaire et de nutrition Anses – Agence nationale de sécurité sanitaire de l’alimentation, de l’environnement et du travail [Online]. Available at: https://www.anses.fr/fr/content/inca-3-evolution-des-habitudes-et-modes-de-consommation-de-nouveaux-enjeux-en-mati%C3%A8re-de.

ANSES (2018). Avis et rapport de l’Anses relatif à l’attribution des sources des maladies infectieuses d’origine alimentaire. Partie 2 : Analyse des données épidémiologiques [Online]. Available at: https://www.anses.fr/fr/system/files/BIORISK2015SA0162Ra-2.pdf.

Asakura, H., Boisen, N., Chinen, I., Cook, R., Dallman, T., Devleesschauwer, B., Feng, P., Franz, E., Fratamico, P., Gill, A., Griffin, P., Keddy, K., Mainda, G., Majowicz, S., Pires, S.M., Ogunrinola, Y., Scheutz, F., Srimanote, P., Alvarez, R.V., Esteban, E., Lejeune, J., Mylrea, G., Moreira, D., Shaw, W.K., Cahill, S., Ouattara, B., Desmarchelier, P., Nakagawa, R., Zhou, K., Grp, F.W.S.E. (2019). Hazard identification and characterization: Criteria for categorizing Shiga toxin-producing escherichia coli on a risk basis. Journal of Food Protection , 82(1), 7–21.

Augustin, J.-C., Kooh, P., Bayeux, T., Guillier, L., Meyer, T., Jourdan-Da Silva, N., Villena, I., Sanaa, M., Cerf, O., Blanchemanche, S., Bonnaud, L., Gautier, M., Gauchard, F., Nabec, L., Soler, L.-G., ANSES Working Group (2020). Contribution of foods and poor food-handling practices to the burden of foodborne infectious diseases in France. Foods , 9(11), 1644–1661.

Borch, E., Nesbakken, T., Christensen, H. (1996). Hazard identification in swine slaughter with respect to foodborne bacteria. International Journal of Food Microbiology , 30(1–2), 9–25.

Carrascosa, C., Millan, R., Saavedra, P., Jaber, J.R., Raposo, A., Sanjuan, E. (2016). Identification of the risk factors associated with cheese production to implement the hazard analysis and critical control points (HACCP) system on cheese farms. Journal of Dairy Science , 99(4), 2606–2616.

Cartron, F. and Fichet, J.-L. (2020). Vers une alimentation durable : un enjeu sanitaire, social, territorial et environnemental majeur pour la France. Report, Sénat, Paris.

Davies, R.H. and Wray, C. (1994). An approach to reduction of Salmonella infection in broiler chicken flocks through intensive sampling and identification of cross-contamination hazards in commercial hatcheries. International Journal of Food Microbiology , 24(1–2), 147–160.

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