Martinez J. Hewlett - Basic Virology

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The foundational textbook on the study of virology Basic Virology, 4th Edition This undergraduate-accessible book covers all the foundational topics in virology, including:
The basics of virology Virological techniques Molecular biology Pathogenesis of human viral disease The 4th edition includes new information on the SARS, MERS and COVID-19 coronaviruses, hepatitis C virus, influenza virus, as well as HIV and Ebola. New virological techniques including bioinformatics and advances in viral therapies for human disease are also explored in-depth. The book also includes entirely new sections on metapneumoviruses, dengue virus, and the chikungunya virus.

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CHAPTER 3 Virus Disease in Populations and Individual Animals

THE NATURE OF VIRUS RESERVOIRS

Some viruses with human reservoirs

Some viruses with vertebrate reservoirs

VIRUSES IN POPULATIONS

Viral epidemiology in small and large populations

Factors affecting the control of viral disease in populations

ANIMAL MODELS TO STUDY VIRAL PATHOGENESIS

A mouse model for studying poxvirus infection and spread

Rabies: Where is the virus during its long incubation period?

Herpes simplex virus latency Murine models Rabbit models Guinea pig models

QUESTIONS FOR CHAPTER 3

THE NATURE OF VIRUS RESERVOIRS

Since viruses must replicate to survive, actively infected populations are the usual source of infection. Still, some viruses such as poxviruses, noroviruses, and coronaviruseshave a high resistance to desiccation. In this case a contaminated object such as a desk, pen, book, contaminated clothing, or other inanimate object can be identified as the immediate reservoir. The persistence of some viruses in fecal material is also a potentially long‐lasting, essentially passive reservoir of infection. Noroviruses, which are notorious for causing outbreaks of diarrhea on cruise ships and in nursing homes, are extremely difficult to eliminate from these facilities after an outbreak. Other viruses can even persist for long periods of time in arid environments. The last documented cases of smallpox in Somalia were apparently acquired from contaminated soil. Aerosols of infectious hantavirusand canine parvoviruscan be infectious for many months after secretion. Also, some viruses, especially hepatitis A virus, can be isolated from contaminated water sources for several days or even weeks after inoculation.

Figure 31Some transmission routes of specific viruses from their source - фото 8

Figure 3.1Some transmission routes of specific viruses from their source (reservoir) to humans. The mode of transmission (vector) is also shown.

Source: Based on Mims, C.A. and White, D.O. (1984). Viral Pathogenesis and Immunology . Boston: Blackwell Science.

Even though infectious virus can sometimes be maintained for a time in the environment in a passive state, viruses are more commonly transmitted via contact with an infectious host. The two most usual reservoirs for human disease are other humans or other animals ( zoonosis). Often this transmission requires direct contact between hosts, or may involve an intermediate vector such as a mosquito or tick; modes of spread of some human viruses are illustrated in Figure 3.1, and pathogenic viruses and their reservoirs discussed in this section are listed in Table 3.1.

Some viruses with human reservoirs

A significant number of human viruses leading to either mild or life‐threatening disease are maintained solely in human populations. The list runs the gamut from colds caused mainly by rhinoviruses, warts caused by papillomaviruses, to AIDS caused by HIV. The mode of passage of viruses between humans (i.e., the vector) is intimately linked to human behavior. This behavior can be modified by the disease symptoms themselves. Thus, a respiratory infection leads to irritation of the airways resulting in coughing and sneezing, which spreads an aerosol of droplets containing virus. Herpes simplex virus 1 (HSV‐1) is spread in saliva resulting in transfer of the virus to the recipient's oral epithelial cells; in contrast, the closely related varicella zoster virus (VZV, or chickenpox) is spread by inhalation of a virus‐loaded aerosol or dust containing dead skin flakes. Warts are spread by direct physical contact between the virus‐loaded source (another wart or dead skin from a wart) and layers of the skin below the keratinized epidermis exposed by small cuts or abrasions. Poliovirus and the related coxsackieviruses are spread by virus‐containing feces contaminating food, drinks, or fomites that are ingested; this is termed oral‐fecal spread . In the case of HIV, body fluids – including blood, breast milk, serum, vaginal secretions, and seminal fluid – are sources of infection. The virus can be spread by passive inoculation of, for example, a contaminated hypodermic syringe, or by transfusion, breastfeeding, or sexual activity.

Table 3.1Some pathogenic viruses, their vectors or routes of spread, and their hosts.

Virus Vector/Route Host Disease
Poliovirus Human–fecal contamination of water or food Human Enteric infection; in rare cases, CNS infection (poliomyelitis)
Western equine encephalitis Mosquito Horse Viral encephalitis in the horse – occasional infection of human
La Crosse encephalitis Mosquito Squirrel, fox (reservoir); human No obvious disease in squirrel or fox; viral encephalitis in human
Sin Nombre virus (hantavirus) Deer mouse Deer mouse, other rodents (reservoir); human Hantavirus hemorrhagic respiratory distress syndrome
HIV Direct injection of virus‐infected body fluids into blood Human AIDS
Measles Aerosol Human Skin rash, neurological involvement
Yellow fever Mosquito Tropical monkeys; human Malaise, jaundice
Chikungunya Mosquito Human, primates Mild to severe hemorrhagic and arthritic disease
Dengue fever Mosquito Human, primates Mild to severe hemorrhagic disease
Ebola Unknown vector, but nosocomial transmission Fruit bat; humans and primates Often fatal hemorrhagic fever
Hepatitis A Fecal contamination of water or food Human Acute hepatitis
Hepatitis B Direct injection of blood Human Chronic hepatitis, liver carcinoma
Hepatitis C Direct injection of blood Human Acute and chronic hepatitis
Hepatitis delta Blood, requires coinfection with hepatitis B Human Acute hepatitis
Hepatitis E Fecal contamination of water or food Human Mild acute hepatitis, except often fatal to pregnant women
Norovirus Fecal contamination of water or food Human Severe diarrhea
Rabies Bite of infected animal Vertebrates Fatal encephalitis
Herpes simplex virus (HSV) Saliva, other secretions Human Surface lesions followed by latency, rare encephalitis
Varicella zoster (VZV, or chickenpox) Aerosol, infected skin cells (dander) Human Rash, shingles, latency
Epstein–Barr virus (EBV) Saliva Human Infectious mononucleosis, latency
Influenza Aerosol Human, many vertebrates Flu
Myxoma Insect bite Rabbits Variable mortality, skin lesions
Rhinovirus Aerosol Human Colds
Coronavirus (CoV) Aerosol Civet cat (SARS‐CoV); camel (MERS‐CoV); human Colds, SARS, MERS, COVID‐19
Rubella (German measles) Aerosol Human Mild rash, severe neurological involvement in first‐trimester fetus
Adenovirus Aerosol, saliva Human Mild respiratory disease
Papillomavirus Contact Human Benign warts, some venereally transmitted, some correlated with cervical carcinomas
HTLV (human T‐cell leukemia virus) Injection of blood Human Leukemia
Tomato spotted wilt (bunyavirus) Thrip Broad range of plant species Necrosis of plant tissue, destruction of crops
Cadang‐cadang (viroid) Physical transmission via pruning Coconut palm Coconut palm pathology
Prion (protein pathogen) Ingestion or inoculation of prion protein Human, other mammals have specific types, cross‐species spread possible Non‐inflammatory encephalopathy
Plant rhabdoviruses Leaf hoppers, aphids, plant hoppers Broad range of plant species Necrosis of plant tissue, destruction of crops
Zika virus Mosquito Human, primates Mild to severe disease, microencephaly, Guillain–Barré syndrome

Some viruses with vertebrate reservoirs

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